getMotifOccurrences.RdFind occurrences of motifs in a given genome
getMotifOccurrences(motifNames = NULL, motifDb = "jaspar", genome = "hg38")character vector of motif names
either a character string (currently only "jaspar" and sets contained in chromVARmotifs ("homer", "encode", "cisbp") are supported) or an object containing PWMs
that can be used by motifmatchr::matchMotifs (such as an PFMatrixList or PWMatrixList object)
character string specifying genome assembly
a GenomicRangesList containing motif occurrences