annotationMatches

annotationMatches

annotationMatches(object)

annotationMatches(object) <- value

# S4 method for SummarizedExperiment
annotationMatches(object)

# S4 method for SummarizedExperiment
annotationMatches(object) <- value

Arguments

object	SummarizedExperiment with matches slot, see details
value	logical Matrix with annotation matches

Value

logical matrix of annotation matches

Details

Will extract matrix from the "matches", "annotationMatches", or "motif_matches" assay of a SummarizedExperiment

Examples

# NOT RUN {
# load annotation matrix; result from matchMotifs
data(mini_ix, package = "chromVAR")
matches <- annotationMatches(mini_ix)
# }